Posts Tagged ‘Omniviz’

Omniviz – Dynamic Metadata Signatures

Monday, December 7th, 2009

Omniviz

BioWisdom’s OmniViz Analytics Engine harnesses Intelligent Metadata, powerful algorithms and visual summaries to enabled unparalleled insight over complex data. Millions of records  and billions of data points – no problem.

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The Omniviz Learning Centre

Tuesday, February 16th, 2010

OmnivizThe OmniViz Learning Centre provides quick start guides and their complementary video demonstrations designed to introduce new OmniViz users to the tools and visualizations that make up OmniViz.  From importing data into a data set to creating views of the data to exploring those views with Galaxy, Comet or ThemeMap–the guides will help you harness the power of OmniViz!

For more experienced users, the longer tutorials and their videos will take you beyond default settings and describe advanced workflows.  From learning how to refine the vocabulary of a text data set to using the advanced features of CoMet to special topics in patent analysis—the tutorials will hone your analytical skills.

You can also view recordings from our webinar series.

Latest additions

Topics in Literature Analysis

Topics in Numerical Analysis

Omniviz Case Studies

Tuesday, February 16th, 2010

The following downloads provide several case studies and application notes around using OmniViz in specific research areas.

Case Studies

Application Notes

Omniviz – Technical Specifications

Tuesday, February 16th, 2010

OmniViz Technical Specifications

Minimum Requirements

750MHz Processor
512MB Memory
20GB free disc space (dependent on the size and number of data sets to be analyzed)
32MB AGP Graphics Card (see below for important information on graphics hardware)
Windows XP/2000

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Finding Patterns in Numeric Data using the Galaxy Visualization

Tuesday, February 16th, 2010

This quick start guide explains how to understand the Galaxy layout with numeric data, and shows how to see data patterns with the plotting tool.

Tools Data Set Editor, View Editor, Galaxy,
Profile Plot and Record Viewer
Experience Level Beginner
Length 4 pages / 4:32 minutes
Prerequisites None
Download Quick Start Guide - Numeric Patterns Galaxy Quick Start Guide - Numeric Patterns Galaxy

Download Quick Start Guide - Numeric Patterns VideoQuick Start Guide - Numeric Patterns Video

Biomarker Analysis and Discovery in OmniViz

Tuesday, February 16th, 2010

This webinar discusses how to perform a statistical analysis in order to find the analyses that best discriminate between groups in a data set.

Tools Galaxy, Group, TreeScape,
Relativity and Correlation
Experience Level Intermediate
Length 53:44 minutes
Prerequisites None
Download BioWisdom OmniViz Webinar May 2009BioWisdom OmniViz Webinar May 2009
Download BioWisdom OmniViz Webinar Nov 2008 Slides BioWisdom OmniViz Webinar Nov 2008 Slides

Finding Specific Patterns in Numeric Data using Omniviz

Tuesday, February 16th, 2010

This quick start guide shows how to use the Query By Example tool in Numeric Query to find the most similar records in your data set.

Tools Numeric Query, Galaxy, Profile Plot
and Record Viewer
Experience Level Intermediate
Length 4 pages / 5:36 minutes
Prerequisites None
Download Quick Start Guide - Numeric Query By Example Quick Start Guide - Numeric Query By Example
Download Quick Start Guide - Numeric Query By ExampleQuick Start Guide - Numeric Query By Example

Importing Medline Documents into OmniViz

Tuesday, February 16th, 2010

This quick start guide shows the simple steps for importing Medline search results into OmniViz.

Tools Data Import Wizard, Galaxy
Experience Level Beginner
Length 4 pages / 2:30 minutes
Prerequisites None
Download Quick Start Guide - PubMed Import Quick Start Guide - PubMed Import
Download Quick Start Guide - PubMed Import VideoQuick Start Guide - PubMed Import Video

Understanding the Thematic Landscape of a Set of Patents

Tuesday, February 16th, 2010

This tutorial explains how to explore the Galaxy and ThemeMap visualizations to understand the scope and organization of the themes in your patent data set.

Note: This download is a set of tutorials and auxiliary files—it should be installed into your OmniViz directory.

Tools Galaxy, ThemeMap, Record Viewer and Gist
Experience Level Intermediate
Length 9 pages / 5:22 minutes
Prerequisites Importing Patents
OR

Downloading with Patent Harvester
Download Tutorial - OmniViz Patent Harvester Download Tutorial - OmniViz Patent Harvester Download

Download Quick Start Guide - OmniViz Basic Patent ExploreQuick Start Guide - OmniViz Basic Patent Explore

Analysing PubMed Data in OmniViz

Tuesday, February 16th, 2010

This webinar shows how to refine a set of documents and its vocabulary in more detail.  It includes identifying and eliminating outlier records and unwanted themes by creating a subset view and using Gist to refine the vocabulary of the document set.

Tools Galaxy, Gist, Record Viewer, Group,
Query, View Editor and CoMet
Experience Level Intermediate
Length 51:00 minutes
Prerequisites None
Download BioWisdom OmniViz Webinar Dec 2008BioWisdom OmniViz Webinar Dec 2008
Download BioWisdom OmniViz Webinar Dec 2008 Slides BioWisdom OmniViz Webinar Dec 2008 Slides